Tutorials

• Tutorial
  • 1. Import CellRefiner and packages
  • 2. Load Data
  • 3. Run cellrefiner cell to spot mapping and spatial refinement
  • 4. Cell shape modeling
  • 5. Contact-based communication analysis
  • Visualize all contact-based communications
• Benchmarking on pseudo-ST data
  • 1. Import CellRefiner and packages
  • 2. Load Data
  • 3. Run cellrefiner cell to spot mapping and spatial refinement